Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE13331.1 | kynU | SAMN04488567_0927 | SAMN04488567_0380 | Catalase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.861 |
SDE13909.1 | SDE33158.1 | SAMN04488567_0947 | SAMN04488567_1318 | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | Alpha/beta hydrolase fold. | 0.504 |
SDE13909.1 | kynU | SAMN04488567_0947 | SAMN04488567_0380 | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.556 |
SDE17936.1 | SDE33158.1 | SAMN04488567_1098 | SAMN04488567_1318 | Salicylate hydroxylase. | Alpha/beta hydrolase fold. | 0.426 |
SDE17936.1 | SDF03675.1 | SAMN04488567_1098 | SAMN04488567_3286 | Salicylate hydroxylase. | Putative cyclase. | 0.510 |
SDE17936.1 | kynU | SAMN04488567_1098 | SAMN04488567_0380 | Salicylate hydroxylase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.517 |
SDE33158.1 | SDE13909.1 | SAMN04488567_1318 | SAMN04488567_0947 | Alpha/beta hydrolase fold. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.504 |
SDE33158.1 | SDE17936.1 | SAMN04488567_1318 | SAMN04488567_1098 | Alpha/beta hydrolase fold. | Salicylate hydroxylase. | 0.426 |
SDE33158.1 | SDF23739.1 | SAMN04488567_1318 | SAMN04488567_3706 | Alpha/beta hydrolase fold. | anthraniloyl-CoA monooxygenase. | 0.465 |
SDE33158.1 | kynA | SAMN04488567_1318 | SAMN04488567_3700 | Alpha/beta hydrolase fold. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.922 |
SDE33158.1 | kynU | SAMN04488567_1318 | SAMN04488567_0380 | Alpha/beta hydrolase fold. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.951 |
SDF03675.1 | SDE17936.1 | SAMN04488567_3286 | SAMN04488567_1098 | Putative cyclase. | Salicylate hydroxylase. | 0.510 |
SDF03675.1 | kynA | SAMN04488567_3286 | SAMN04488567_3700 | Putative cyclase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.923 |
SDF03675.1 | kynU | SAMN04488567_3286 | SAMN04488567_0380 | Putative cyclase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.968 |
SDF23570.1 | SDF23739.1 | SAMN04488567_3701 | SAMN04488567_3706 | 2-aminobenzoate-CoA ligase. | anthraniloyl-CoA monooxygenase. | 0.996 |
SDF23570.1 | kynA | SAMN04488567_3701 | SAMN04488567_3700 | 2-aminobenzoate-CoA ligase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.887 |
SDF23570.1 | kynU | SAMN04488567_3701 | SAMN04488567_0380 | 2-aminobenzoate-CoA ligase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.727 |
SDF23739.1 | SDE33158.1 | SAMN04488567_3706 | SAMN04488567_1318 | anthraniloyl-CoA monooxygenase. | Alpha/beta hydrolase fold. | 0.465 |
SDF23739.1 | SDF23570.1 | SAMN04488567_3706 | SAMN04488567_3701 | anthraniloyl-CoA monooxygenase. | 2-aminobenzoate-CoA ligase. | 0.996 |
SDF23739.1 | kynA | SAMN04488567_3706 | SAMN04488567_3700 | anthraniloyl-CoA monooxygenase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.821 |
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