STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF47284.1Glycosyl transferase family 2. (327 aa)    
Predicted Functional Partners:
SDE59721.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
  
  
 0.959
SDE59791.1
precorrin-8X methylmutase.
  
 
 0.921
SDE59698.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase.
  
  
 0.881
SDE59741.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
  
  
 0.819
cbiD
cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 
 0.800
SDE94811.1
Hypothetical protein.
     0.773
SDE45287.1
Hypothetical protein.
  
     0.744
SDE94962.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
  
 
 0.734
SDE06612.1
precorrin-6A/cobalt-precorrin-6A reductase.
  
 
 0.712
SDE69962.1
Hypothetical protein.
  
     0.683
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.