STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE02175.1Sorbitol ABC transporter membrane protein. (290 aa)    
Predicted Functional Partners:
SDE02214.1
Sorbitol/mannitol transport system permease protein.
  0.996
SDE02143.1
Sorbitol-binding protein /mannitol-binding protein.
  0.994
SDE02251.1
Sorbitol ABC transporter ATP-binding protein.
 
  0.993
SDE02310.1
Mannitol 2-dehydrogenase.
 
     0.804
SDF03030.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.792
SDE02284.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.783
SDE33428.1
Maltooligosaccharide ABC transporter membrane protein.
 
  0.781
SDE33501.1
Maltooligosaccharide-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
   
  0.751
SDF44533.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.737
SDE15421.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.735
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.