STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepALeucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (491 aa)    
Predicted Functional Partners:
SDE16750.1
DNA polymerase III, chi subunit.
  
    0.896
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.895
SDE52176.1
Aminopeptidase N.
   
 0.894
SDE60945.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
  
  
 
0.891
SDE70698.1
Aromatic amino acid aminotransferase apoenzyme.
    
 0.886
SDE91398.1
Cysteine synthase A.
    
 0.882
SDF17409.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
     
 0.879
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.873
SDE59640.1
Cystathione beta-lyase.
   
 
  0.861
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
  
  0.741
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.