STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE31539.1Chromosome partitioning protein. (269 aa)    
Predicted Functional Partners:
SDE31507.1
L-amino acid N-acyltransferase YncA.
       0.773
SDF37009.1
ParB/RepB/Spo0J family partition protein.
   
 
 0.739
SDE79903.1
Chromosome partitioning protein, ParB family.
   
 
 0.739
SDE31475.1
Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC.
       0.686
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
    0.669
SDE65134.1
Chromosome segregation DNA-binding protein; Manually curated; Belongs to the ParB family.
  
 
 0.617
SDF02241.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
 
 0.617
SDF28210.1
Ubiquinone biosynthesis protein COQ9.
  
     0.616
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.606
SDE32541.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.579
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.