STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE34701.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (373 aa)    
Predicted Functional Partners:
SDE34668.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SDE34734.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.997
SDE34765.1
Nucleoside-binding protein.
 
 
 0.993
SDE36066.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
SDE36134.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.989
SDE36034.1
Nucleoside-binding protein.
 
 
 0.974
SDE36096.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.893
SDE34630.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.836
SDE34575.1
Conserved hypothetical protein.
       0.709
SDE34595.1
Hypothetical protein.
       0.709
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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