STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE47971.1Alpha-glucosidase. (528 aa)    
Predicted Functional Partners:
SDF35687.1
Trehalose synthase /maltokinase.
 
0.881
SDF35629.1
4-alpha-glucanotransferase.
  
 
 0.705
SDF19559.1
Sucrose-phosphate synthase.
   
 0.693
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.674
SDF17754.1
Alpha-galactosidase.
   
 
 0.663
SDF00221.1
Beta-fructofuranosidase.
  
 
 0.647
SDE66832.1
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.638
SDE02634.1
Phosphoglucomutase.
    
 0.630
SDE43010.1
Fructokinase.
    
  0.621
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.591
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.