STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE58970.1Glyoxalase family protein. (310 aa)    
Predicted Functional Partners:
SDE58998.1
Phospholipase/carboxylesterase.
  
 0.995
SDE04564.1
methylmalonyl-CoA mutase.
    
 0.935
SDE34425.1
Methylmalonyl-CoA mutase.
    
 0.935
SDF23739.1
anthraniloyl-CoA monooxygenase.
    
 0.789
SDF26121.1
Cu+-exporting ATPase.
    
  0.749
SDE95878.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
 0.748
SDE78233.1
Aldo/keto reductase.
   
 0.735
SDE95909.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 
 0.716
SDE58939.1
Aldehyde dehydrogenase (NAD+).
    
 0.715
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.704
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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