STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE68509.1Fructuronate reductase; Belongs to the mannitol dehydrogenase family. (449 aa)    
Predicted Functional Partners:
SDE68540.1
Glucuronate isomerase.
 
 
 0.987
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.956
SDE68483.1
2-dehydro-3-deoxygluconokinase.
 
  
  0.861
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
     
 0.810
SDF16476.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.809
SDE68571.1
DNA-binding transcriptional regulator, GntR family.
     0.788
SDE43010.1
Fructokinase.
    
 0.740
SDE03979.1
Threonine dehydrogenase; Manually curated.
    
 0.629
SDF20014.1
L-threonine 3-dehydrogenase.
    
 0.629
SDE66996.1
PTS IIA-like nitrogen-regulatory protein PtsN.
  
 
 0.604
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.