STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE70595.1Ammonium transporter, Amt family. (449 aa)    
Predicted Functional Partners:
SDE05910.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SDE70552.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SDE67370.1
Glutamate synthase (NADPH) large subunit.
 
  
 0.908
SDF41805.1
Diguanylate cyclase (GGDEF) domain-containing protein.
      0.882
SDF30738.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
     0.876
SDE81204.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
      0.850
SDE42433.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
      0.831
SDE12981.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
  
 
 0.825
SDF08954.1
PAS domain S-box-containing protein.
 
 
 0.726
bchL
Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
  
  
 0.694
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.