STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE77825.1Peptide/nickel transport system permease protein. (308 aa)    
Predicted Functional Partners:
SDE77799.1
Peptide/nickel transport system permease protein.
 
  0.971
SDE77856.1
Peptide/nickel transport system substrate-binding protein.
  0.943
SDE78136.1
Peptide/nickel transport system permease protein.
 
 
  0.930
SDE36773.1
Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the binding-protein-dependent transport system permease family.
 
 0.924
SDE15292.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.899
SDE95351.1
Dipeptide transport system permease protein.
 
 
  0.889
SDE98629.1
Peptide/nickel transport system permease protein.
 
 
  0.873
SDF01397.1
Peptide/nickel transport system permease protein.
 
 
  0.867
SDF02416.1
Peptide/nickel transport system permease protein.
 
 
  0.866
SDE81766.1
Peptide/nickel transport system permease protein.
 
 
  0.864
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.