STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE83113.1Thioredoxin reductase (NADPH). (296 aa)    
Predicted Functional Partners:
SDE64392.1
Thioredoxin; Belongs to the thioredoxin family.
 
 0.960
SDE58914.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.937
SDE59387.1
Thioredoxin.
  
 0.925
SDE67370.1
Glutamate synthase (NADPH) large subunit.
    
 0.919
SDF10186.1
Thioredoxin reductase (NADPH).
  
  
 
0.864
SDE61085.1
Selenophosphate synthase.
    
 0.846
SDE40419.1
PAS domain S-box-containing protein.
    
 0.810
SDE70005.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 
 0.796
SDE95878.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
 0.790
SDE79118.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
    
 0.787
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.