STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE83747.1Predicted amidohydrolase. (292 aa)    
Predicted Functional Partners:
SDE67370.1
Glutamate synthase (NADPH) large subunit.
    
 0.899
SDE40928.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.790
SDF09095.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
  0.737
SDE58939.1
Aldehyde dehydrogenase (NAD+).
   
  0.713
SDE39864.1
4-hydroxyphenylpyruvate dioxygenase.
   
  0.695
SDE17123.1
Agmatinase; Belongs to the arginase family.
  
 0.693
SDE83771.1
Osmoprotectant transport system substrate-binding protein.
 
     0.690
SDE83728.1
2-methylcitrate dehydratase PrpD.
 
     0.678
SDF09546.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.664
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
  0.662
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.