STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE89661.1Response regulator receiver domain-containing protein; Manually curated. (143 aa)    
Predicted Functional Partners:
bchL
Ferredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
   
  
 0.808
SDE03047.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
     0.772
SDE03137.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
  
     0.759
SDE18564.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
  
 0.752
SDE68838.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
   
 0.748
SDF24121.1
PAS domain S-box-containing protein.
 
   
 0.748
SDE84797.1
PAS domain S-box-containing protein.
 
   
 0.735
SDE08772.1
PAS domain S-box-containing protein.
 
  
 0.718
SDE03107.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.715
SDE04230.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
   
 0.684
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.