STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE95768.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. (324 aa)    
Predicted Functional Partners:
SDE95796.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 0.999
SDE95827.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 0.999
SDE95851.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.999
SDE95878.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.998
SDE95909.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
  
 0.986
SDE95652.1
acyl-CoA thioesterase.
 
 
 0.984
SDE95625.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 
 0.969
SDE95685.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.957
SDE92860.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.947
SDE95716.1
Transcriptional regulator, PaaX family.
 
   
 0.880
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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