STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF02798.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (264 aa)    
Predicted Functional Partners:
SDF02908.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.996
SDF02859.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.962
SDF02885.1
Polar amino acid transport system permease protein.
 
  0.960
SDE40419.1
PAS domain S-box-containing protein.
   
 0.921
SDE35563.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.912
SDF41988.1
L-glutamine ABC transporter membrane protein.
 0.879
SDF41958.1
L-glutamine ABC transporter ATP-binding protein.
 
  0.861
SDE41469.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.859
SDF44217.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.857
SDF44245.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.857
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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