STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF09328.1NitT/TauT family transport system permease protein. (281 aa)    
Predicted Functional Partners:
SDF09266.1
NitT/TauT family transport system ATP-binding protein.
 
  0.964
SDF09361.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.958
SDE76798.1
NitT/TauT family transport system ATP-binding protein.
 
  0.929
SDE15648.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
 
  0.900
SDE76820.1
NitT/TauT family transport system substrate-binding protein.
 
  0.886
SDE64001.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.885
SDF09299.1
NitT/TauT family transport system permease protein.
 
  
 
0.872
SDE64031.1
NitT/TauT family transport system ATP-binding protein.
 
  0.825
SDE15703.1
Putative hydroxymethylpyrimidine transport system ATP-binding protein.
 
  0.782
SDE40018.1
Alkanesulfonate monooxygenase.
   
 
  0.729
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.