STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF17850.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (308 aa)    
Predicted Functional Partners:
SDF17792.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.978
SDF17871.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.952
SDF17754.1
Alpha-galactosidase.
 
    0.939
SDF17726.1
Beta-galactosidase.
 
     0.938
SDF17928.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.902
SDE15421.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.883
SDF03030.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.874
SDE37003.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.861
SDE68737.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.850
SDF00985.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.844
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.