STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kole_0373PFAM: TrkA-N domain protein; KEGG: mca:MCA2849 potassium transporter peripheral membrane component. (150 aa)    
Predicted Functional Partners:
Kole_0375
PFAM: cation transporter; KEGG: dol:Dole_3217 TrkH family potassium uptake protein.
 
 
 0.984
Kole_0374
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pla:Plav_3126 potassium transporter peripheral membrane component.
 
 
  
0.935
hisS
KEGG: geo:Geob_2622 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein.
       0.789
Kole_0372
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_4458 multi-sensor hybrid histidine kinase.
     
 0.786
Kole_0369
PFAM: FeoA family protein; KEGG: mgm:Mmc1_1730 FeoA family protein.
 
     0.668
Kole_0371
Hypothetical protein.
       0.554
Kole_0370
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.550
Kole_0377
KEGG: bha:BH1414 hypothetical protein.
   
   0.537
Kole_0379
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: ppd:Ppro_0322 pyruvate/ketoisovalerate oxidoreductase, gamma subunit.
   
 
 0.533
Kole_0381
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: nam:NAMH_0242 pyruvate synthase subunit PorA.
  
  
 0.506
Your Current Organism:
Kosmotoga olearia
NCBI taxonomy Id: 521045
Other names: K. olearia TBF 19.5.1, Kosmotoga olearia TBF 19.5.1, Thermotogales bacterium TBF 19.5.1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.