STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (367 aa)    
Predicted Functional Partners:
Kole_0949
KEGG: gbm:Gbem_4017 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
 0.999
Kole_1921
KEGG: aba:Acid345_0343 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
 0.985
Kole_0202
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: mxa:MXAN_3507 UDP-glucose 4-epimerase.
  
 
 0.912
Kole_0522
PFAM: glycoside hydrolase clan GH-D; KEGG: hypothetical protein.
 
  
 0.711
Kole_0478
PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: efe:EFER_2372 alpha-mannosidase.
  
    0.572
Kole_0676
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: hypothetical LOC579607.
  
 
 0.548
Kole_0677
PFAM: oxidoreductase domain protein; KEGG: baa:BA_4144 GFO_IDH_MocA, oxidoreductase family, NAD-binding Rossmann fold.
  
 
 0.548
Kole_0689
PFAM: oxidoreductase domain protein; KEGG: hypothetical LOC579607.
  
 
 0.548
Kole_0987
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: hap:HAPS_1534 myoinositol 2-dehydrogenase with oxidoreductase domain.
  
 
 0.548
mviM
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eli:ELI_13345 lipopolysaccharide biosynthesis protein.
  
 
 0.548
Your Current Organism:
Kosmotoga olearia
NCBI taxonomy Id: 521045
Other names: K. olearia TBF 19.5.1, Kosmotoga olearia TBF 19.5.1, Thermotogales bacterium TBF 19.5.1
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