STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Kole_1069Sucrose-phosphate synthase; PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A2267 sucrose-phosphate phosphatase. (480 aa)    
Predicted Functional Partners:
Kole_0299
PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_0781 glycosyl transferase, group 1 family protein.
     
  0.900
Kole_1070
PFAM: PfkB domain protein; KEGG: bar:GBAA0752 fructokinase.
 
  
 0.882
Kole_0899
KEGG: bha:BH1086 required for glycogen biosynthesis; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase.
 
 
 0.840
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.835
Kole_1071
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_0230 binding-protein-dependent transport systems inner membrane component.
       0.732
Kole_1072
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_0229 binding-protein-dependent transport systems inner membrane component.
       0.732
Kole_1073
PFAM: extracellular solute-binding protein family 1; KEGG: pna:Pnap_0227 extracellular solute-binding protein.
 
     0.588
Kole_0242
KEGG: gur:Gura_4193 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
 
 
 0.479
Kole_1074
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: bha:BH1553 DeoR family transcriptional regulator.
       0.447
Kole_1284
PFAM: polysaccharide biosynthesis protein; KEGG: vsp:VS_0223 putative capsular polysaccharide repeating unit transporter CpsL.
  
  
 0.408
Your Current Organism:
Kosmotoga olearia
NCBI taxonomy Id: 521045
Other names: K. olearia TBF 19.5.1, Kosmotoga olearia TBF 19.5.1, Thermotogales bacterium TBF 19.5.1
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