STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kole_2000PFAM: FAD linked oxidase domain protein; KEGG: gur:Gura_0648 FAD linked oxidase domain-containing protein. (466 aa)    
Predicted Functional Partners:
Kole_1999
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: sfu:Sfum_1373 electron transfer flavoprotein, alpha subunit.
 
 
 0.956
Kole_1998
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sfu:Sfum_1372 electron transfer flavoprotein beta-subunit.
 
 
 0.955
Kole_2169
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: afw:Anae109_2506 D-3-phosphoglycerate dehydrogenase.
 
 
 0.933
Kole_0882
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sfu:Sfum_3914 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
   
 0.932
Kole_2168
PFAM: aminotransferase class V; KEGG: sus:Acid_1660 phosphoserine aminotransferase / L-aspartate aminotransferase.
  
 
 0.842
Kole_1997
PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: bsu:BSU01530 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.580
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
 0.496
Kole_0574
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: glo:Glov_0867 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
  
 0.485
Kole_2054
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: mgm:Mmc1_2208 NADH dehydrogenase subunit B.
  
   0.478
Kole_2051
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mgm:Mmc1_2205 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.474
Your Current Organism:
Kosmotoga olearia
NCBI taxonomy Id: 521045
Other names: K. olearia TBF 19.5.1, Kosmotoga olearia TBF 19.5.1, Thermotogales bacterium TBF 19.5.1
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