STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kole_2002PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3846 ABC transporter (permease). (312 aa)    
Predicted Functional Partners:
Kole_2001
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3847 ABC transporter (permease).
 
  0.993
Kole_2003
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3845 ABC transporter (substrate-binding protein).
 
  0.988
Kole_1992
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20971 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
  
  0.933
Kole_0287
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bha:BH1140 sugar ABC transportor ATP-binding protein.
 
 0.917
Kole_1219
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: baa:BA_4693 multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.915
Kole_1993
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3689 sugar transport system (permease).
  
  
 
0.907
Kole_0869
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cju:C8J_0699 ABC transport system ATP-binding protein.
  
 0.892
Kole_1392
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vsp:VS_II0222 ABC transporter: transmembrane protein; Maltooligosaccharide uptake.
 
 
 0.835
Kole_0813
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ect:ECIAI39_1664 putative sugar transporter subunit: permease component of ABC superfamily transporter.
   0.778
Kole_2084
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3987 putative sugar ABC transporter (permease protein).
 
   0.724
Your Current Organism:
Kosmotoga olearia
NCBI taxonomy Id: 521045
Other names: K. olearia TBF 19.5.1, Kosmotoga olearia TBF 19.5.1, Thermotogales bacterium TBF 19.5.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.