STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kole_2082PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dps:DP3066 4-hydroxybenzoyl-CoA reductase HcrA. (779 aa)    
Predicted Functional Partners:
Kole_2076
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sfu:Sfum_2011 (2Fe-2S)-binding domain protein.
 
 0.998
Kole_2081
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: reu:Reut_B3596 ferredoxin:(2Fe-2S)-binding.
 
 0.998
Kole_2080
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: dps:DP3068 4-hydroxybenzoyl-CoA reductase HcrB.
 
 
 0.984
Kole_2079
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: dat:HRM2_37990 two-component fusion protein (N:molybdopterin dehydrogenase, FAD-binding domain-C:carbon monoxide dehydrogenase medium chain).
 
 0.982
Kole_2078
KEGG: sus:Acid_2901 hypothetical protein.
 
  
 0.946
Kole_2068
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: Os07g0657900; hypothetical protein.
    
  0.938
Kole_2077
KEGG: mlo:mlr0093 hypothetical protein.
 
   
 0.912
Kole_0306
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dal:Dalk_2405 thioredoxin reductase.
     
  0.900
Kole_2083
PFAM: extracellular solute-binding protein family 1; KEGG: aha:AHA_1667 maltose ABC transporter periplasmic protein.
       0.773
Kole_2074
TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dihydroorotate dehydrogenase family protein.
  
  
 0.770
Your Current Organism:
Kosmotoga olearia
NCBI taxonomy Id: 521045
Other names: K. olearia TBF 19.5.1, Kosmotoga olearia TBF 19.5.1, Thermotogales bacterium TBF 19.5.1
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