Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Apar_0010PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS1586 ThiP protein. (569 aa)    
Predicted Functional Partners:
Apar_0011
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sfu:Sfum_3496 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.996
Apar_0009
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS1583 TbpA protein.
 
 
 0.989
Apar_1106
Hypothetical protein; KEGG: bcr:BCAH187_A5430 putative lipoprotein.
 
 
 0.977
Apar_0266
TIGRFAM: cell wall/surface repeat protein; PFAM: surface protein from Gram-positive cocci anchor region; KEGG: similar to zymogen granule membrane glycoprotein 2.
  
     0.592
Apar_0607
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ban:BA4232 sugar ABC transporter, ATP-binding protein.
 
   
 0.435
Your Current Organism:
Atopobium parvulum
NCBI taxonomy Id: 521095
Other names: A. parvulum DSM 20469, Atopobium parvulum ATCC 33793, Atopobium parvulum DSM 20469, Atopobium parvulum JCM 10300, Atopobium parvulum str. DSM 20469, Atopobium parvulum strain DSM 20469
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.