STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apar_1313Hypothetical protein. (112 aa)    
Predicted Functional Partners:
Apar_1314
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: aha:AHA_2339 fructose permease IID component.
       0.540
Apar_1315
PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: spe:Spro_4279 phosphotransferase system PTS sorbose-specific IIC subunit.
       0.538
Apar_1316
PFAM: PTS system sorbose subfamily IIB component; KEGG: spe:Spro_4280 PTS system sorbose subfamily IIB component.
       0.506
Apar_1312
PFAM: SNARE associated Golgi protein; KEGG: sfv:SFV_2386 hypothetical protein.
       0.439
Apar_1317
PFAM: PTS system fructose subfamily IIA component; KEGG: ent:Ent638_2386 PTS system mannose/fructose/sorbose family IIA subunit.
       0.409
Your Current Organism:
Atopobium parvulum
NCBI taxonomy Id: 521095
Other names: A. parvulum DSM 20469, Atopobium parvulum ATCC 33793, Atopobium parvulum DSM 20469, Atopobium parvulum JCM 10300, Atopobium parvulum str. DSM 20469, Atopobium parvulum strain DSM 20469
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.