Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0015Protein of unknown function DUF21; KEGG: mgi:Mflv_2683 CBS domain-containing protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein. (450 aa)    
Predicted Functional Partners:
Tpau_0016
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: rha:RHA1_ro03326 CBS domain-containing protein.
 
   
0.903
Tpau_2318
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: nfa:nfa25120 hypothetical protein.
 
   
0.660
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
  
 0.489
Tpau_0014
Hypothetical protein.
       0.471
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.401
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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