Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0058PFAM: glycosyl transferase group 1; KEGG: mmi:MMAR_4514 glycosyl transferase. (366 aa)    
Predicted Functional Partners:
Tpau_0057
KEGG: rop:ROP_39590 dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related.
  
  
 0.776
Tpau_0061
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: mpa:MAP0963c hypothetical protein.
 
  
 0.693
Tpau_0062
PFAM: glycosyl transferase group 1; KEGG: fre:Franean1_0751 glycosyl transferase group 1.
  
     0.669
Tpau_2271
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05742 sugar transferase; PFAM: sugar transferase.
 
  
 0.661
Tpau_1579
PFAM: glycosyl transferase group 1; KEGG: mab:MAB_1019c glycosyl transferase.
  
     0.648
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.583
Tpau_0060
PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: mul:MUL_4676 glycosyltransferase.
 
  
0.516
Tpau_0052
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rer:RER_13170 glycosyltransferase; PFAM: sugar transferase.
 
  
 0.502
Tpau_3046
KEGG: mab:MAB_3511c DNA helicase II; PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein.
    
 
 0.498
Tpau_2615
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05438 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.475
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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