Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0061PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: mpa:MAP0963c hypothetical protein. (523 aa)    
Predicted Functional Partners:
Tpau_0060
PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: mul:MUL_4676 glycosyltransferase.
 
  
 0.974
Tpau_0059
KEGG: mpa:MAP0961c hypothetical protein.
 
  
 0.971
Tpau_0062
PFAM: glycosyl transferase group 1; KEGG: fre:Franean1_0751 glycosyl transferase group 1.
 
  
 0.910
Tpau_0066
KEGG: art:Arth_4126 O-antigen polymerase.
 
  
 0.825
Tpau_2271
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05742 sugar transferase; PFAM: sugar transferase.
  
  
 0.777
Tpau_2984
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: rop:ROP_55130 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase.
  
  
 0.716
Tpau_3787
KEGG: rer:RER_02500 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.716
Tpau_0161
TIGRFAM: UDP-galactopyranose mutase; KEGG: msm:MSMEG_6404 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like.
  
  
 0.709
Tpau_0058
PFAM: glycosyl transferase group 1; KEGG: mmi:MMAR_4514 glycosyl transferase.
 
  
 0.693
Tpau_2299
KEGG: rha:RHA1_ro07244 hypothetical protein.
 
  
 0.671
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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