Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0085PFAM: regulatory protein TetR; KEGG: sen:SACE_3479 TetR family transcriptional regulator. (219 aa)    
Predicted Functional Partners:
Tpau_0087
KEGG: rer:RER_23360 oxidoreductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase.
       0.778
Tpau_0086
PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0561 putative acetyltransferase.
       0.773
Tpau_3133
PFAM: regulatory protein TetR; KEGG: mab:MAB_1576 TetR family transcriptional regulator.
  
     0.771
Tpau_0088
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rha:RHA1_ro08338 ErfK/YbiS/YcfS/YnhG family lipoprotein.
       0.686
Tpau_3271
PFAM: regulatory protein TetR; KEGG: mav:MAV_5227 TetR-family protein transcriptional regulator, putative.
  
     0.662
Tpau_3796
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18060 putative Mce family protein.
  
     0.575
Tpau_2367
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11150 putative Mce family protein.
  
     0.562
Tpau_1240
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11200 putative Mce family protein.
  
     0.550
Tpau_1672
KEGG: svi:Svir_03570 GDSL-like lipase/acylhydrolase.
  
     0.546
Tpau_0084
KEGG: msm:MSMEG_2697 hypothetical protein.
       0.528
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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