Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0086PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0561 putative acetyltransferase. (165 aa)    
Predicted Functional Partners:
Tpau_0087
KEGG: rer:RER_23360 oxidoreductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase.
       0.776
Tpau_0085
PFAM: regulatory protein TetR; KEGG: sen:SACE_3479 TetR family transcriptional regulator.
       0.773
Tpau_0088
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rha:RHA1_ro08338 ErfK/YbiS/YcfS/YnhG family lipoprotein.
 
    0.736
Tpau_0083
PFAM: Negative transcriptional regulator; KEGG: pmy:Pmen_0131 FMN-binding negative transcriptional regulator.
  
    0.539
Tpau_0084
KEGG: msm:MSMEG_2697 hypothetical protein.
       0.522
Tpau_0082
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ami:Amir_0226 alpha/beta hydrolase fold-3 domain protein.
       0.483
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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