Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0101KEGG: nfa:nfa24770 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (299 aa)    
Predicted Functional Partners:
Tpau_0100
KEGG: rha:RHA1_ro02954 anibiotic ABC transporter efflux pump.
 
 
 0.978
Tpau_2394
KEGG: saq:Sare_3403 multidrug ABC transporter inner membrane protein; TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter.
 
  
 0.758
Tpau_0102
KEGG: sco:SCO3632 hypothetical protein.
 
     0.632
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.569
Tpau_3986
PFAM: ABC-2 type transporter; KEGG: nfa:nfa31150 putative ABC transporter membrane protein.
 
  
 0.528
Tpau_0795
KEGG: rha:RHA1_ro01550 protein-N(pi)- phosphohistidine--sugar phosphotransferase; PFAM: phosphotransferase system EIIC.
 
      0.411
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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