Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0110PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro03731 alpha/beta hydrolase. (308 aa)    
Predicted Functional Partners:
Tpau_0112
PFAM: RNA-binding S4 domain protein; KEGG: mgi:Mflv_3643 RNA-binding S4 domain- containing protein.
       0.513
Tpau_0111
KEGG: mab:MAB_3790 hypothetical protein.
       0.466
Tpau_0091
KEGG: rha:RHA1_ro03732 hypothetical protein.
 
     0.448
Tpau_2890
PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6846 alpha/beta hydrolase.
  
     0.439
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.