Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0134KEGG: rer:RER_01720 hypothetical protein. (298 aa)    
Predicted Functional Partners:
Tpau_0132
KEGG: nfa:nfa1240 hypothetical protein.
       0.810
Tpau_0131
Rhodanese domain protein; KEGG: nfa:nfa1230 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
    0.797
Tpau_0133
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: nfa:nfa1250 putative glycerophosphoryl diester phosphodiesterase.
       0.752
Tpau_2436
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: rop:ROP_07100 putative methyltransferase.
  
     0.664
Tpau_0415
KEGG: rha:RHA1_ro05189 xylose transporter.
  
     0.636
Tpau_3038
KEGG: rop:ROP_64490 hypothetical protein.
  
     0.562
Tpau_3331
Chorismate mutase; KEGG: nfa:nfa49960 hypothetical protein; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase.
  
     0.554
Tpau_1185
KEGG: nfa:nfa46230 hypothetical protein.
  
     0.514
leuS
KEGG: rer:RER_59970 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.502
Tpau_0130
PFAM: peptidase S49; KEGG: ami:Amir_0066 peptidase S49.
     
 0.497
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.