Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0158KEGG: mjl:Mjls_5404 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase. (277 aa)    
Predicted Functional Partners:
Tpau_0157
KEGG: mab:MAB_0165 putative acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
       0.836
Tpau_0156
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rop:ROP_39230 hypothetical protein.
     
 0.719
Tpau_0155
KEGG: sgr:SGR_4457 hypothetical protein.
       0.557
Tpau_0154
KEGG: rer:RER_00790 hypothetical protein.
       0.472
Tpau_2899
PFAM: amino acid-binding ACT domain protein; KEGG: nfa:nfa42600 hypothetical protein.
 
    0.418
Tpau_2834
PFAM: Dak phosphatase; KEGG: rha:RHA1_ro06515 kinase related to hydroxyacetone kinase.
  
    0.410
pgi
KEGG: rha:RHA1_ro05567 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family.
  
 
 0.401
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.