Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0162KEGG: nfa:nfa1770 putative galactofuranosyltransferase. (651 aa)    
Predicted Functional Partners:
Tpau_4102
PFAM: glycosyl transferase family 2; KEGG: rop:ROP_39760 galactofuranosyltransferase.
 
  
 0.989
Tpau_0161
TIGRFAM: UDP-galactopyranose mutase; KEGG: msm:MSMEG_6404 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like.
 
  
 0.968
Tpau_0164
PFAM: UbiA prenyltransferase; KEGG: rer:RER_02140 hypothetical protein.
  
  
 0.929
Tpau_0165
KEGG: rop:ROP_39350 arabinosyltransferase AftB.
 
  
 0.907
Tpau_0163
KEGG: mva:Mvan_5648 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related.
 
   
 0.831
Tpau_2271
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05742 sugar transferase; PFAM: sugar transferase.
  
  
 0.707
Tpau_4100
PFAM: ABC-2 type transporter; KEGG: cdi:DIP0175 ABC transporter permease.
 
  
 0.691
Tpau_0160
SpoIID/LytB domain protein; KEGG: rop:ROP_39290 hypothetical protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein.
  
    0.624
Tpau_0171
KEGG: mab:MAB_0178 cutinase precursor.
 
 
 
 0.619
Tpau_0168
PFAM: putative esterase; LGFP repeat protein; KEGG: nfa:nfa1840 putative esterase.
 
   
 0.614
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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