Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0163KEGG: mva:Mvan_5648 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related. (202 aa)    
Predicted Functional Partners:
Tpau_0164
PFAM: UbiA prenyltransferase; KEGG: rer:RER_02140 hypothetical protein.
 
  
 0.925
Tpau_0165
KEGG: rop:ROP_39350 arabinosyltransferase AftB.
 
  
 0.870
Tpau_0162
KEGG: nfa:nfa1770 putative galactofuranosyltransferase.
 
   
 0.831
Tpau_0161
TIGRFAM: UDP-galactopyranose mutase; KEGG: msm:MSMEG_6404 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like.
       0.785
Tpau_0160
SpoIID/LytB domain protein; KEGG: rop:ROP_39290 hypothetical protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein.
       0.597
Tpau_0365
KEGG: nfa:nfa54850 hypothetical protein.
 
     0.574
Tpau_1171
TIGRFAM: DivIVA domain; KEGG: rer:RER_41650 hypothetical protein.
  
     0.543
Tpau_0166
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: fal:FRAAL1683 putative zinc-binding oxidoreductase.
       0.526
Tpau_4137
PFAM: cell wall arabinan synthesis protein; KEGG: mgi:Mflv_1175 cell wall arabinan synthesis protein.
  
     0.524
Tpau_2426
PFAM: UspA domain protein; KEGG: rop:ROP_07030 putative Usp family protein.
 
   
 0.520
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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