Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0171KEGG: mab:MAB_0178 cutinase precursor. (313 aa)    
Predicted Functional Partners:
Tpau_0168
PFAM: putative esterase; LGFP repeat protein; KEGG: nfa:nfa1840 putative esterase.
 
  
 0.862
Tpau_0165
KEGG: rop:ROP_39350 arabinosyltransferase AftB.
 
     0.829
Tpau_4137
PFAM: cell wall arabinan synthesis protein; KEGG: mgi:Mflv_1175 cell wall arabinan synthesis protein.
 
 
 0.810
Tpau_4138
PFAM: cell wall arabinan synthesis protein; KEGG: msm:MSMEG_6388 arabinosyltransferase B.
 
 
 0.810
Tpau_1783
PFAM: cell wall arabinan synthesis protein; KEGG: rop:ROP_39470 arabinosyltransferase.
 
 
 0.808
Tpau_4139
PFAM: cell wall arabinan synthesis protein; KEGG: rop:ROP_39460 arabinosyltransferase.
 
 
 0.808
Tpau_1896
PFAM: Protein of unknown function DUF2029; KEGG: rer:RER_28550 arabinosyltransferase AftC.
  
     0.774
Tpau_0179
PFAM: putative esterase; KEGG: rop:ROP_50250 mycolyltransferase.
 
   
 0.769
lpqB
PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: rha:RHA1_ro06326 lipoprotein LpqB.
 
     0.759
Tpau_0180
PFAM: putative esterase; KEGG: rop:ROP_50250 mycolyltransferase.
 
   
 0.755
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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