Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0176PFAM: carboxyl transferase; KEGG: rha:RHA1_ro04066 propionyl-CoA carboxylase. (527 aa)    
Predicted Functional Partners:
Tpau_0175
PFAM: Beta-ketoacyl synthase; Acyl transferase; Thioesterase; phosphopantetheine-binding; KEGG: rha:RHA1_ro04065 polyketide synthase.
  
 
 0.988
Tpau_1315
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase.
  
 
 0.980
Tpau_1031
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rer:RER_21210 acyl-CoA carboxylase alpha chain.
 
 0.965
Tpau_1042
Hypothetical protein.
   
 0.937
Tpau_1043
PFAM: carboxyl transferase; KEGG: nfa:nfa9940 putative acyl-CoA carboxylase beta subunit.
  
  
 
0.906
Tpau_1264
KEGG: rer:RER_38950 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
 
 0.823
Tpau_0177
D-lactate dehydrogenase (cytochrome); KEGG: rer:RER_51320 FAD-linked oxidase; PFAM: FAD linked oxidase domain protein.
     
 0.778
Tpau_0174
PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_39420 long-chain fatty acyl-AMP ligase FadD32.
  
 
 0.727
Tpau_0860
PFAM: carboxyl transferase; KEGG: rer:RER_45670 acetyl-CoA carboxylase beta chain.
  
 
0.666
Tpau_1864
PFAM: AMP-dependent synthetase and ligase; KEGG: cai:Caci_4379 AMP-dependent synthetase and ligase.
  
 0.664
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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