Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0193PFAM: NAD-dependent epimerase/dehydratase; KEGG: ach:Achl_2748 NAD-dependent epimerase/dehydratase. (216 aa)    
Predicted Functional Partners:
Tpau_0284
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: msm:MSMEG_3964 pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
    0.744
Tpau_0194
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kra:Krad_4013 lysine exporter protein (LysE/YggA).
       0.639
Tpau_0195
KEGG: ach:Achl_0269 transcriptional regulator, ArgP, LysR family; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate- binding.
       0.462
Tpau_0196
KEGG: mgi:Mflv_0311 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region; SMART: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region.
       0.400
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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