Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
Tpau_0195KEGG: ach:Achl_0269 transcriptional regulator, ArgP, LysR family; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate- binding. (297 aa)    
Predicted Functional Partners:
Tpau_0194
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kra:Krad_4013 lysine exporter protein (LysE/YggA).
 
   
 0.965
Tpau_2973
PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro06435 TetR family transcriptional regulator.
  
   0.693
Tpau_0136
KEGG: nfa:nfa1290 putative transcriptional regulator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
   
    0.673
Tpau_0196
KEGG: mgi:Mflv_0311 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region; SMART: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region.
       0.651
Tpau_3750
PFAM: helix-turn-helix HxlR type; KEGG: sen:SACE_6745 MarR family transcriptional regulator.
   
  
 0.634
Tpau_1622
KEGG: rha:RHA1_ro00074 response regulator, two- component system; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
   
  
 0.630
Tpau_2510
Putative transcriptional regulator; PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: rer:RER_30540 hypothetical protein.
   
  
 0.627
Tpau_3197
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mab:MAB_0998 LysR family transcriptional regulator.
   
  
 0.624
Tpau_3248
Two component transcriptional regulator, winged helix family; KEGG: sma:SAV_2395 two-component system response regulator for high-affinity potassium transport system; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
   
  
 0.568
Tpau_0339
KEGG: sen:SACE_5167 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain.
   
  
 0.558
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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