Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0199KEGG: rha:RHA1_ro00326 hypothetical protein. (128 aa)    
Predicted Functional Partners:
Tpau_0200
KEGG: rer:RER_45540 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
 
    0.818
Tpau_0198
PFAM: peptidase S58 DmpA; KEGG: fal:FRAAL5354 hypothetical protein.
       0.771
Tpau_2242
KEGG: nfa:nfa51010 hypothetical protein.
  
    0.692
Tpau_1836
KEGG: rop:ROP_68000 hypothetical membrane protein.
  
     0.668
Tpau_0197
KEGG: mgi:Mflv_0488 hypothetical protein.
       0.652
Tpau_1263
Myosin; KEGG: rha:RHA1_ro01457 myosin.
 
     0.650
Tpau_1973
KEGG: rop:ROP_69140 hypothetical protein.
  
     0.644
Tpau_0201
KEGG: mav:MAV_1056 ATP-dependent DNA ligase; TIGRFAM: DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; mRNA capping enzyme.
     
 0.629
Tpau_0024
KEGG: sen:SACE_0036 hypothetical protein.
  
     0.622
Tpau_2865
KEGG: rop:ROP_65380 hypothetical membrane protein.
  
     0.620
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.