Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0279PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit. (302 aa)    
Predicted Functional Partners:
Tpau_0278
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.865
Tpau_0277
PFAM: Integrase catalytic region; KEGG: msm:MSMEG_4105 transposase subunit.
 
    
0.645
Tpau_0276
PFAM: transposase IS3/IS911 family protein; KEGG: mlu:Mlut_10240 transposase.
  
    0.579
Tpau_0280
KEGG: mva:Mvan_5448 luciferase family protein; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like, subgroup.
       0.547
Tpau_1667
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.461
Tpau_0273
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.430
Tpau_0303
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.430
Tpau_1647
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.430
Tpau_2472
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.430
Tpau_2607
PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein.
 
    0.430
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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