Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tpau_0333PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: msm:MSMEG_0083 membrane-anchored mycosin mycp1. (480 aa)    
Predicted Functional Partners:
Tpau_0864
Secretion protein snm4; KEGG: nfa:nfa8270 hypothetical protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
 
 
 0.970
Tpau_0332
Secretion protein snm4; KEGG: msm:MSMEG_0068 transmembrane protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
 
  
 0.924
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
 
  
 0.912
Tpau_0331
KEGG: msm:MSMEG_0067 hypothetical protein.
 
     0.901
Tpau_3367
PFAM: protein of unknown function DUF690; KEGG: nfa:nfa8250 hypothetical protein.
 
 
 0.897
Tpau_0865
Cell division FtsK/SpoIIIE; KEGG: nfa:nfa8290 putative FtsK/SpoIIIE family protein; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
 
 
 0.874
Tpau_1490
PFAM: cutinase; KEGG: msm:MSMEG_1403 cutinase superfamily protein.
  
 
 0.773
Tpau_0657
KEGG: rer:RER_16250 hypothetical protein.
  
     0.685
Tpau_3112
KEGG: mkm:Mkms_4179 hypothetical protein.
  
     0.684
Tpau_0335
KEGG: mul:MUP011 transmembrane serine/threonine- protein kinase PknQ; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; periplasmic binding protein; SMART: serine/threonine protein kinase; tyrosine protein kinase.
   
 
 0.648
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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