Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Tpau_0352PFAM: conserved hypothetical protein; KEGG: mab:MAB_4524 hypothetical protein. (396 aa)    
Predicted Functional Partners:
Tpau_0165
KEGG: rop:ROP_39350 arabinosyltransferase AftB.
 
  
 0.683
Tpau_0365
KEGG: nfa:nfa54850 hypothetical protein.
 
   
 0.643
Tpau_2927
KEGG: rha:RHA1_ro06456 hypothetical protein.
  
     0.630
Tpau_0353
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: mkm:Mkms_3090 putative signal transduction histidine kinase.
     
 0.629
Tpau_0170
KEGG: nfa:nfa1860 hypothetical protein.
  
   
 0.609
Tpau_1488
PFAM: acyl-ACP thioesterase; KEGG: mtb:TBMG_01985 hypothetical protein.
  
     0.603
Tpau_3905
KEGG: nfa:nfa3620 hypothetical protein.
  
     0.588
Tpau_0171
KEGG: mab:MAB_0178 cutinase precursor.
  
   
 0.586
Tpau_3374
KEGG: nfa:nfa8180 hypothetical protein.
  
    0.579
Tpau_0179
PFAM: putative esterase; KEGG: rop:ROP_50250 mycolyltransferase.
 
   
 0.570
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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