Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0357KEGG: mab:MAB_2469 hypothetical protein. (92 aa)    
Predicted Functional Partners:
Tpau_0358
PFAM: guanine-specific ribonuclease N1 and T1; KEGG: mab:MAB_2468 putative guanyl-specific ribonuclease Sa.
 
 
 0.944
Tpau_0946
PFAM: guanine-specific ribonuclease N1 and T1; KEGG: rer:RER_20080 guanyl-specific ribonuclease.
  
 
 0.646
Tpau_1227
KEGG: mab:MAB_2268c hypothetical protein.
  
     0.641
Tpau_0359
PFAM: regulatory protein TetR; KEGG: rop:ROP_11210 putative TetR family transcriptional regulator.
       0.613
Tpau_0868
KEGG: mab:MAB_4706c hypothetical protein.
  
     0.594
Tpau_0356
PFAM: fumarate lyase; Fumarase C-like; KEGG: aau:AAur_3794 aspartate ammonia-lyase.
       0.572
Tpau_2730
KEGG: mab:MAB_1013 hypothetical protein.
 
     0.563
Tpau_1225
PFAM: UspA domain protein; KEGG: mkm:Mkms_1198 UspA domain-containing protein.
  
     0.556
Tpau_3783
KEGG: mab:MAB_0923c hypothetical protein.
  
     0.544
Tpau_1307
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: rop:ROP_56700 putative CdaR family transcriptional regulator.
  
     0.515
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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