Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0364KEGG: mva:Mvan_0196 large membrane protein. (997 aa)    
Predicted Functional Partners:
Tpau_0365
KEGG: nfa:nfa54850 hypothetical protein.
  
  
 0.707
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.705
Tpau_0368
PFAM: major facilitator superfamily MFS_1; KEGG: mjl:Mjls_2428 major facilitator transporter.
 
 
   0.572
Tpau_0367
PFAM: protein of unknown function DUF1396; KEGG: mjl:Mjls_2429 hypothetical protein.
       0.493
Tpau_0371
KEGG: mab:MAB_4503c hypothetical protein.
       0.429
Tpau_0369
KEGG: nfa:nfa54810 hypothetical protein.
       0.426
Tpau_0370
KEGG: rop:ROP_52280 hypothetical membrane protein.
       0.421
Tpau_0175
PFAM: Beta-ketoacyl synthase; Acyl transferase; Thioesterase; phosphopantetheine-binding; KEGG: rha:RHA1_ro04065 polyketide synthase.
 
 
 
 0.411
Tpau_1825
PFAM: protein of unknown function DUF75; KEGG: rop:ROP_67900 hypothetical protein.
  
     0.409
Tpau_1488
PFAM: acyl-ACP thioesterase; KEGG: mtb:TBMG_01985 hypothetical protein.
  
     0.401
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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