Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0365KEGG: nfa:nfa54850 hypothetical protein. (221 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.935
Tpau_1896
PFAM: Protein of unknown function DUF2029; KEGG: rer:RER_28550 arabinosyltransferase AftC.
  
     0.739
Tpau_0170
KEGG: nfa:nfa1860 hypothetical protein.
 
   
 0.736
Tpau_0171
KEGG: mab:MAB_0178 cutinase precursor.
 
   
 0.733
Tpau_0364
KEGG: mva:Mvan_0196 large membrane protein.
  
  
 0.707
Tpau_0165
KEGG: rop:ROP_39350 arabinosyltransferase AftB.
  
   
 0.704
Tpau_3905
KEGG: nfa:nfa3620 hypothetical protein.
  
     0.688
Tpau_4138
PFAM: cell wall arabinan synthesis protein; KEGG: msm:MSMEG_6388 arabinosyltransferase B.
  
   
 0.647
Tpau_0352
PFAM: conserved hypothetical protein; KEGG: mab:MAB_4524 hypothetical protein.
 
   
 0.643
Tpau_4121
KEGG: rer:RER_02330 arabinosyltransferase AftA.
 
     0.630
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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