Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0381PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rop:ROP_14630 histamine dehydrogenase. (700 aa)    
Predicted Functional Partners:
Tpau_0107
KEGG: rop:ROP_35350 glutamate synthase large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II.
  
 
 0.999
Tpau_2917
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: nfa:nfa42790 putative electron transfer flavoprotein beta subunit.
  
 
 0.910
Tpau_0379
PFAM: protein of unknown function DUF1028; KEGG: msm:MSMEG_1680 hypothetical protein.
 
     0.878
Tpau_1784
PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: rha:RHA1_ro00724 2-oxoacid ferredoxin oxidoreductase.
   
 
 0.868
Tpau_2916
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: rha:RHA1_ro06463 electron transfer flavoprotein alpha-subunit.
  
 
 0.868
Tpau_0375
KEGG: msm:MSMEG_1682 flavin-containing monooxygenase FMO.
 
   
 0.837
Tpau_0376
PFAM: Endoribonuclease L-PSP; KEGG: msm:MSMEG_1681 endoribonuclease L-PSP superfamily protein.
 
     0.805
Tpau_0382
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rha:RHA1_ro01787 LysR family transcriptional regulator.
 
 
 
 0.718
Tpau_3173
NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 
 0.696
Tpau_1599
KEGG: nca:Noca_2884 hypothetical protein.
 
 
 
 0.671
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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