Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0389PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase. (252 aa)    
Predicted Functional Partners:
Tpau_3606
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro05664 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.780
Tpau_2230
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bja:bll4020 short chain dehydrogenase.
  
     0.773
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
  
     0.770
Tpau_1688
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein.
  
     0.765
Tpau_3699
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fre:Franean1_6415 short-chain dehydrogenase/reductase SDR.
 
    0.760
Tpau_2974
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_57060 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.758
Tpau_3600
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mjl:Mjls_5029 short chain dehydrogenase.
  
     0.754
Tpau_3805
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_09570 oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.743
Tpau_1857
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro02340 3-oxoacyl-[acyl-carrier- protein] reductase.
  
     0.741
Tpau_0045
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mab:MAB_1526 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.738
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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